Typical Procedure for Bilayer Simulations

1. Create Bilayer

2. Membrane Simulation

3. Production Run

4. Analysis

5. Membrane Protein Analysis

Non-standard Bilayer Builds

1. Membranes+Chemicals

2. PMF of chemicals (1-D)

3. Dual Bilayer+Chemical

4. Mutating a lipid

5. Asymmetric Bilayer